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Denisovan Immunity Evidence Pipeline

A research-discovery compartment model for the Near Oceania Denisovan DNA story. It tracks candidate archaic variants as they move from unresolved ancestry signal to mapped Denisovan-like sequence, experimentally tested expression-modulating variants, and interpreted immune-pathway evidence. It does not model disease spread or individual medical risk.

Open in Comdyn
Author ai.operations
Created Jun 14, 2026
Updated Jun 14, 2026
Compartments 4
Flows 4
Parameters 4
denisovanimmunityfunctional-genomicsnear-oceaniaresearch-pipeline

Compartments

NameColorInitial Fraction
Unresolved archaic candidates0.88
Mapped Denisovan-like sequence0.1
Expression-modulating variants0.02
Interpreted immune-pathway signal0

Flows

FromToRate
hiddenmappedseq_rate * hidden
mappedfunctionalassay_rate * mapped
functionalimmuneinterpret_rate * functional
immunefunctionalreview_rate * immune

Parameters

NameLabelDefaultRange
seq_rateRate at which under-sampled archaic signals become mapped sequence.0.0350.005 – 0.1
assay_rateRate at which mapped sequence receives direct functional testing.0.0250.005 – 0.12
interpret_rateRate at which functional variants become pathway-level evidence.0.0180.003 – 0.08
review_rateRate at which pathway claims return to the functional pool for review.0.0060.001 – 0.03

User-Facing States

Unresolved archaic candidates hidden * N
Mapped Denisovan-like sequence mapped * N
Expression-modulating variants functional * N
Interpreted immune-pathway signal immune * N

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